Merge branch 'fix/parser' into 'main'

Fix/parser and more

See merge request !21

environment.yaml

@@ -23,9 +23,9 @@ dependencies:
     - boto3
     - rio-cogeo
     - openeo-processes-dask[implementations]
+    - openeo-pg-parser-networkx<=2024.4.0
     - pystac-client
     - openeo
-    - openeo-pg-parser-networkx
     - rio-stac
     - build
     - setuptools>=61.0

pyproject.toml

@@ -13,12 +13,28 @@ requires = [
     "ujson",
     "rio-cogeo",
     "setuptools>=61.0",
+    "dask"
 ]
 build-backend = "setuptools.build_meta"
 
+[tool.setuptools]
+packages = ["raster2stac"]
+
 [project]
 name = "raster2stac"
 version = "SEMANTIC_VERSION"
+dependencies = [
+    "kerchunk",
+    "openeo-pg-parser-networkx==2024.4.0",
+    "openeo-processes-dask[implementations]",
+    "rio-stac",
+    "boto3",
+    "netcdf4==1.6.5",
+    "h5netcdf",
+    "h5py",
+    "ujson",
+    "openeo"
+]
 authors = [
     { name = "Michele Claus", email = "michele.claus@eurac.edu" },
     { name = "Lorenzo Mercurio", email = "lorenzo.mercurio@eurac.edu" },
@@ -26,7 +42,7 @@ authors = [
 ]
 description = "Create valid STAC Collections, Items and Assets given already existing raster datasets"
 readme = "README.md"
-requires-python = ">=3.6"
+requires-python = ">=3.10"
 classifiers = [
     "Programming Language :: Python :: 3",
     "License :: OSI Approved :: MIT License",

raster2stac/raster2stac.py

@@ -714,7 +714,6 @@ class Raster2STAC:
             source_path = os.path.dirname(self.data)
             local_conn = LocalConnection(source_path)
             self.data = local_conn.load_collection(self.data).execute()
-            self.data_ds = self.data.to_dataset(dim=self.B_DIM)
         else:
             raise Exception(
                 "Please provide a path to a valid file or an xArray DataArray or Dataset object!"
@@ -730,6 +729,9 @@ class Raster2STAC:
             f"Extracted label dimensions from input are:\nx dimension:{self.X_DIM}\ny dimension:{self.Y_DIM}\nbands dimension:{self.B_DIM}\ntemporal dimension:{self.T_DIM}"
         )
 
+        if self.data_ds is None:
+            self.data_ds = self.data.to_dataset(dim=self.B_DIM)
+
         spatial_extents = []
         temporal_extents = []
 

raster2stac/rioxarray_stac.py

@@ -223,7 +223,7 @@ def rioxarray_get_raster_info(  # noqa: C901
     # Missing `bits_per_sample` and `spatial_resolution`
     # It should contain only one band/variable
     # for band in src_dst.indexes:
-    if src_dst.attrs["scale_factor"]:
+    if src_dst.attrs.get("scale_factor",False):
         value = {
             "data_type": str(src_dst.dtype),
             "scale": src_dst.attrs["scale_factor"],
@@ -235,7 +235,7 @@ def rioxarray_get_raster_info(  # noqa: C901
         }
 
     # add offset
-    if src_dst.attrs["add_offset"]:
+    if src_dst.attrs.get("add_offset",False):
         value["offset"] = src_dst.attrs["add_offset"]
     else:
         value["offset"] = 0